Rendering multi-layer .exr files will not obey file path in Output node?

Well, it’s nothing special.

Two View Layers, Two Render Layers and Output nodes.
One is ‘regular’ .exr, the other is multi-layer. exr.

Properties Panel : Output Properties > Output Path is not set. File format is set to .exr
Preferences : File Paths > Render > Render Output path is set to V:\Renders

If it works work you, than I’m not sure why it fails here. Image is a basic test setup.

rob